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5 kirjaa tekijältä Dan MacLean

Paddling the Yukon River and its Tributaries

Paddling the Yukon River and its Tributaries

Dan MacLean

Publication Consultants
2005
pokkari
Paddling the Yukon River and its Tributaries covers more than 4,000 miles of watery trail. The Yukon, Tanana, Porcupine, Koyukuk, and Kuskokwim Rivers are the five longest rivers in Alaska, extending into the Yukon Territory. This water flows freely, almost entirely undammed. Salmon surge against current. Moose, bears, and wolves wander the banks. Birds swarm in spectacular density. Roads rarely cross. Many residents live a subsistence lifestyle. No permits are required to be here. These channels are a natural path through the last large wilderness in North America.Paddling the Yukon River and its Tributaries approaches journeys of this magnitude like a through-hiker on the Appalachian Trail, but with a canoe or kayak. Each river is described from beginning to end, detailing access points, resupply options, and navigation tips throughout the flow. There are 35 original maps. Although the approach assumes long voyages, information is supplied for a range of trip lengths. Anything from an afternoon to a weekend to a week to a two-month float is possible. Paddling the Yukon River and its Tributaries is the only guide book to paddling the entire Yukon River from beginning to end.
R Bioinformatics Cookbook

R Bioinformatics Cookbook

Dan MacLean

Packt Publishing Limited
2019
nidottu
Over 60 recipes to model and handle real-life biological data using modern libraries from the R ecosystem Key Features Apply modern R packages to handle biological data using real-world examples Represent biological data with advanced visualizations suitable for research and publications Handle real-world problems in bioinformatics such as next-generation sequencing, metagenomics, and automating analyses Book DescriptionHandling biological data effectively requires an in-depth knowledge of machine learning techniques and computational skills, along with an understanding of how to use tools such as edgeR and DESeq. With the R Bioinformatics Cookbook, you’ll explore all this and more, tackling common and not-so-common challenges in the bioinformatics domain using real-world examples. This book will use a recipe-based approach to show you how to perform practical research and analysis in computational biology with R. You will learn how to effectively analyze your data with the latest tools in Bioconductor, ggplot, and tidyverse. The book will guide you through the essential tools in Bioconductor to help you understand and carry out protocols in RNAseq, phylogenetics, genomics, and sequence analysis. As you progress, you will get up to speed with how machine learning techniques can be used in the bioinformatics domain. You will gradually develop key computational skills such as creating reusable workflows in R Markdown and packages for code reuse. By the end of this book, you’ll have gained a solid understanding of the most important and widely used techniques in bioinformatic analysis and the tools you need to work with real biological data.What you will learn Employ Bioconductor to determine differential expressions in RNAseq data Run SAMtools and develop pipelines to find single nucleotide polymorphisms (SNPs) and Indels Use ggplot to create and annotate a range of visualizations Query external databases with Ensembl to find functional genomics information Execute large-scale multiple sequence alignment with DECIPHER to perform comparative genomics Use d3.js and Plotly to create dynamic and interactive web graphics Use k-nearest neighbors, support vector machines and random forests to find groups and classify data Who this book is forThis book is for bioinformaticians, data analysts, researchers, and R developers who want to address intermediate-to-advanced biological and bioinformatics problems by learning through a recipe-based approach. Working knowledge of R programming language and basic knowledge of bioinformatics are prerequisites.
R Bioinformatics Cookbook

R Bioinformatics Cookbook

Dan MacLean

PACKT PUBLISHING LIMITED
2023
nidottu
Discover over 80 recipes for modeling and handling real-life biological data using modern libraries from the R ecosystem Key Features Apply modern R packages to process biological data using real-world examples Represent biological data with advanced visualizations and workflows suitable for research and publications Solve real-world bioinformatics problems such as transcriptomics, genomics, and phylogenetics Purchase of the print or Kindle book includes a free PDF eBook Book DescriptionThe updated second edition of R Bioinformatics Cookbook takes a recipe-based approach to show you how to conduct practical research and analysis in computational biology with R. You’ll learn how to create a useful and modular R working environment, along with loading, cleaning, and analyzing data using the most up-to-date Bioconductor, ggplot2, and tidyverse tools. This book will walk you through the Bioconductor tools necessary for you to understand and carry out protocols in RNA-seq and ChIP-seq, phylogenetics, genomics, gene search, gene annotation, statistical analysis, and sequence analysis. As you advance, you'll find out how to use Quarto to create data-rich reports, presentations, and websites, as well as get a clear understanding of how machine learning techniques can be applied in the bioinformatics domain. The concluding chapters will help you develop proficiency in key skills, such as gene annotation analysis and functional programming in purrr and base R. Finally, you'll discover how to use the latest AI tools, including ChatGPT, to generate, edit, and understand R code and draft workflows for complex analyses. By the end of this book, you'll have gained a solid understanding of the skills and techniques needed to become a bioinformatics specialist and efficiently work with large and complex bioinformatics datasets.What you will learn Set up a working environment for bioinformatics analysis with R Import, clean, and organize bioinformatics data using tidyr Create publication-quality plots, reports, and presentations using ggplot2 and Quarto Analyze RNA-seq, ChIP-seq, genomics, and next-generation genetics with Bioconductor Search for genes and proteins by performing phylogenetics and gene annotation Apply ML techniques to bioinformatics data using mlr3 Streamline programmatic work using iterators and functional tools in the base R and purrr packages Use ChatGPT to create, annotate, and debug code and workflows Who this book is forThis book is for bioinformaticians, data analysts, researchers, and R developers who want to address intermediate-to-advanced biological and bioinformatics problems by learning via a recipe-based approach. Working knowledge of the R programming language and basic knowledge of bioinformatics are prerequisites.
Knowing God Intimately: A Discovery of Security Identity & Destiny

Knowing God Intimately: A Discovery of Security Identity & Destiny

Dan MacLean

Createspace Independent Publishing Platform
2018
nidottu
Sometimes, you don't know what you don't know. The truth is, you can be as close to God as you know His heart is towards you. The concepts in this book are not just for Sunday morning. They're practical and powerful Monday morning in relationships, in business, in ministry, and in life period. Everything you are, have, and can do is an exchange made from His heart to yours. It's where the what, why, and how of life is discovered.Knowing God Intimately delves into Scriptures that will change your filter from self-consciousness to Christ-consciousness. You don't need another New Year's resolution; you need a New Creation revelation of Christ in you CAUTION Reading this book will give you the biblical reasons to lose man-made religious concepts and gain a relationship, to move from ceremony to substance, and experience the things of God that sticks with you instead of being like a Teflon Christian where nothing sticks. You'll learn to live from your born-again spirit where the knowledge of Christ defines you. If you're tired of hearing what you're supposed to do and be, and want to land squarely on the Gospel message and the Who of it all, this book was written for you